How to use the snakemake.utils.report function in snakemake

Genomes with >90% completeness and <5% contamination:

.. raw:: html

    {div[table]}


See full list at Table_1_.


Downloads
---------

    """
    report(
        report_str,
        report_out,
        Table_1=bin_table,
        stylesheet=os.path.join(
            os.path.abspath(os.path.dirname(__file__)), "report.css"
        ),

Summary
-------


"""+\
    Report_numbers+\
    Report_read_quality_qc+\
    Report_read_quality_raw+"""

Downloads
---------

"""


    report(
        report_str,
        report_out,
        Table1=read_counts,
        stylesheet=os.path.join(
            os.path.abspath(os.path.dirname(__file__)), "report.css"
        ),

Percent of Assembled Reads
**************************

.. raw:: html

    {div[Percent_Assembled_Reads]}


For more information see Table_1_


Downloads
---------

"""
    report(report_str, report_out, Table_1=combined_stats, stylesheet=os.path.join(atlas_dir,'report', "report.css"))