How to use the nglview.show_file function in nglview

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github michellab / BioSimSpace / python / BioSimSpace / Notebook / _view.py View on Github external
if view is None:
            self._num_views += 1

        # Create a PDB object and write to file.
        if system is not None:
            try:
                pdb = _SireIO.PDB2(system)
                pdb.writeToFile(filename)
            except:
                raise IOError("Failed to write system to 'PDB' format.") from None

        # Import NGLView when it is used for the first time.
        import nglview as _nglview

        # Create the NGLview object.
        view = _nglview.show_file(filename)

        # Return the view and display it.
        return view.display(gui=gui)

nglview

IPython widget to interactively view molecular structures and trajectories.

MIT
Latest version published 1 month ago

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