Package Health Score

90 / 100

security
No known security issues
popularity
Popular
maintenance
Healthy
community
Active

Popularity

Popular

GitHub Stars: 725
Forks: 442
Contributors: 160

Direct Usage Popularity

Based on project statistics from the GitHub repository for the PyPI package dipy, we found that it has been starred 725 times.

Security

No known security issues

Security and license risk for latest version

Release Date: Dec 12, 2024
Direct Vulnerabilities: 0
C
0
H
0
M
0
L
Indirect Vulnerabilities: 0
C
0
H
0
M
0
L
License Risk: 0
H
0
M
0
L

All security vulnerabilities belong to production dependencies of direct and indirect packages.

License

BSD-2-Clause

Security Policy

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Maintenance

Healthy

Commit Frequency

Open Issues: 132
Open PR: 34
Last Release: 13 days ago
Last Commit: 6 days ago

Further analysis of the maintenance status of dipy based on released PyPI versions cadence, the repository activity, and other data points determined that its maintenance is Healthy.

We found that dipy demonstrates a positive version release cadence with at least one new version released in the past 3 months.

As a healthy sign for on-going project maintenance, we found that the GitHub repository had at least 1 pull request or issue interacted with by the community.

Community

Active

Readme: Yes
Contributing.md: Yes
Code of Conduct: Yes
Contributors: 160
Funding: No

A good and healthy external contribution signal for dipy project, which invites more than one hundred open source maintainers to collaborate on the repository.

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Package

Python Versions Compatibility: >=3.9

Age: 14 years
Latest Release: 13 days ago
Dependencies: 0 Direct
Versions: 27
Maintainers: 0
Wheels: Linux, macOS, Windows

Not sure how to use dipy?

To help you get started, we've collected the most common ways that dipy is being used within popular public projects.

nipy / dipy / 1.0.0 / _downloads / 034a6637eb62a224f34de94d97ecf916 / tracking_stopping_criterion.py View on Github

- threshold: float

**Stopping States**

- 'ENDPOINT': stops at a position where metric_map &lt; threshold; the streamline
reached the target stopping area.
- 'OUTSIDEIMAGE': stops at a position outside of metric_map; the streamline
reached an area outside the image where no direction data is available.
- 'TRACKPOINT': stops at a position because no direction is available; the
streamline is stopping where metric_map &gt;= threshold, but there is no valid
direction to follow.
- 'INVALIDPOINT': N/A.
"""


tensor_model = TensorModel(gtab)
tenfit = tensor_model.fit(data, mask=labels &gt; 0)
FA = fractional_anisotropy(tenfit.evals)

threshold_criterion = ThresholdStoppingCriterion(FA, .2)

fig = plt.figure()
mask_fa = FA.copy()
mask_fa[mask_fa &lt; 0.2] = 0
plt.xticks([])
plt.yticks([])
plt.imshow(mask_fa[:, :, data.shape[2] // 2].T, cmap='gray', origin='lower',
           interpolation='nearest')
fig.tight_layout()
fig.savefig('threshold_fa.png')

"""

View more ways to use dipy

DIPY [DIPYREF] is a python library for the analysis of MR diffusion imaging.

DIPY is for research only; please contact if you plan to deploy in clinical settings.

Website

Current information can always be found from the DIPY website -

Mailing Lists

Please see the DIPY community list at

Please see the users' forum at

Please join the gitter chatroom here.

Code

You can find our sources and single-click downloads:

Main repository on Github.
Documentation for all releases and current development tree.
Download as a tar/zip file the current trunk.

Installing DIPY

DIPY can be installed using `pip`:

pip install dipy

or using `conda`:

conda install -c conda-forge dipy

For detailed installation instructions, including instructions for installing from source, please read our installation documentation.

Python versions and dependencies

DIPY follows the Scientific Python SPEC 0 — Minimum Supported Versions recommendation as closely as possible, including the supported Python and dependencies versions.

Further information can be found in Toolchain Roadmap.

License

DIPY is licensed under the terms of the BSD license. Please see the LICENSE file.

Contributing

We welcome contributions from the community. Please read our Contributing guidelines.

Reference

DIPYREF

Garyfallidis, M. Brett, B. Amirbekian, A. Rokem,

S. Van Der Walt, M. Descoteaux, I. Nimmo-Smith and DIPY contributors, "DIPY, a library for the analysis of diffusion MRI data", Frontiers in Neuroinformatics, vol. 8, p. 8, Frontiers, 2014.

FAQs

What is dipy?

Diffusion MRI Imaging in Python. Visit Snyk Advisor to see a full health score report for dipy, including popularity, security, maintenance & community analysis.

Is dipy popular?

The python package dipy receives a total of 13,050 weekly downloads. As such, dipy popularity was classified as a popular. Visit the popularity section on Snyk Advisor to see the full health analysis.

Is dipy well maintained?

We found that dipy demonstrated a healthy version release cadence and project activity. It has a community of 160 open source contributors collaborating on the project. See the full package health analysis to learn more about the package maintenance status.

Is dipy safe to use?

The python package dipy was scanned for known vulnerabilities and missing license, and no issues were found. Thus the package was deemed as safe to use. See the full health analysis review.

Last updated on 25 December-2024, at 01:27 (UTC).

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dipy

Diffusion MRI Imaging in Python For more information about how to use this package see README

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Package Health Score

Popularity

Direct Usage Popularity

Security

Security and license risk for latest version

Maintenance

Commit Frequency

Community

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Package

Not sure how to use dipy?

Website

Mailing Lists

Code

Installing DIPY

Python versions and dependencies

License

Contributing

Reference

FAQs

What is dipy?

Is dipy popular?

Is dipy well maintained?

Is dipy safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Fix identified vulnerabilities

Monitor for new issues

Package Health Score

Direct Usage Popularity

Security and license risk for latest version

Commit Frequency

Embed Package Health Score Badge

Keep your project healthy

Check your requirements.txt

Snyk Vulnerability Scanner

Not sure how to use dipy?

Website

Mailing Lists

Code

Installing DIPY

Python versions and dependencies

License

Contributing

Reference

FAQs

What is dipy?

Is dipy popular?

Is dipy well maintained?

Is dipy safe to use?

Build a secure application checklist

Select a recommended open source package

Scan your app for vulnerabilities

Source Code

Open Source

Container

Config

Fix identified vulnerabilities

Monitor for new issues